To integrate a simple normal distribution in python, a solution is to use quad, example:
from scipy.integrate import quad
import matplotlib.pyplot as plt
import scipy.stats
import numpy as np
#----------------------------------------------------------------------------------------#
# Normal Distribution
x_min = 0.0
x_max = 16.0
mean = 8.0
std = 3.0
x = np.linspace(x_min, x_max, 100)
y = scipy.stats.norm.pdf(x,mean,std)
plt.plot(x,y, color='black')
#----------------------------------------------------------------------------------------#
# integration between x1 and x1
def normal_distribution_function(x):
value = scipy.stats.norm.pdf(x,mean,std)
return value
x1 = mean + std
x2 = mean + 2.0 * std
res, err = quad(normal_distribution_function, x1, x2)
print('Normal Distribution (mean,std):',mean,std)
print('Integration bewteen {} and {} --> '.format(x1,x2),res)
#----------------------------------------------------------------------------------------#
# plot integration surface
ptx = np.linspace(x1, x2, 10)
pty = scipy.stats.norm.pdf(ptx,mean,std)
plt.fill_between(ptx, pty, color='#0b559f', alpha='1.0')
#----------------------------------------------------------------------------------------#
plt.grid()
plt.xlim(x_min,x_max)
plt.ylim(0,0.25)
plt.title('How to integrate a normal distribution in python ?',fontsize=10)
plt.xlabel('x')
plt.ylabel('Normal Distribution')
plt.savefig("integrate_normal_distribution.png")
plt.show()
with a mean and standard deviation (std) of 8.0 and 3.0 respectively, the integration between 1 * std and 2 * std
returns:
>>> Normal Distribution (mean,std): 8.0 3.0
>>> Integration bewteen 11.0 and 14.0 --> 0.13590512198327787
It is possible to integrate a function that takes several parameters with quad in python, example of syntax for a function f that takes two arguments: arg1 and arg2:
quad( f, x_min, x_max, args=(arg1,arg2,))
Example of code using quad with a function that takes multiple arguments:
from scipy.integrate import quad
import matplotlib.pyplot as plt
import scipy.stats
import numpy as np
def normal_distribution_function(x,mean,std):
value = scipy.stats.norm.pdf(x,mean,std)
return value
x_min = 0.0
x_max = 30.0
mean = 15.0
std = 4.0
ptx = np.linspace(x_min, x_max, 100)
pty = scipy.stats.norm.pdf(ptx,mean,std)
plt.plot(ptx,pty, color='gray')
plt.fill_between(ptx, pty, color='#e1b1b4', alpha='1.0')
plt.grid()
plt.title('How to integrate a function that takes parameteres in python ?', fontsize=10)
plt.xlabel('x', fontsize=8)
plt.ylabel('Probability Density Function', fontsize=8)
res, err = quad(normal_distribution_function, x_min, x_max, args=(mean,std,))
print(res)
plt.savefig("integrate_function_takes_parameters.png")
plt.show()
References
Links | Site |
---|---|
Best way to write a Python function that integrates a gaussian? | stackoverflow |
quad | ocs.scipy.org |
Integration using the quad method python | stackoverflow |
SciPy - Integrate | tutorialspoint |
How to evaluate single integrals of multivariate functions with Python's scipy.integrate.quad? | stackoverflow |
quad | doc scipy |